Re: [Freesurfer] freesurfer version update issue in MacOS - Freesurfer

12 Dec 2017


      Thank you for your answer, Bruce and Eugenio.
Then the way to do that might be,,
1. Install new version of freesurfer to a new location.
2. Move previous data from old version freesurfer path to the new location.
3. Do what I want (hippo subfield)
Right..?
Thanks.
Sincerely,
Joonyoung.
2017. 12. 12. 오후 5:56에 "Iglesias Gonzalez, Eugenio" e.iglesias@ucl.ac.uk님이
작성:
The answer is yes, indeed.
Just be careful when you report your results, specifying which version you
used for what.
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
http://www.jeiglesias.com
http://cmictig.cs.ucl.ac.uk/
On 12/12/2017, 02:06, "freesurfer-bounces@nmr.mgh.harvard.edu on behalf of
Bruce Fischl" <freesurfer-bounces@nmr.mgh.harvard.edu on behalf of
fischl@nmr.mgh.harvard.edu> wrote:
Hi Joonyoung.
I'll leave this for Eugenio, but I think the answer is yes
cheers
    Bruce
    On Tue, 12 Dec
    2017, 강준영 wrote:
> Hi Bruce!
    > Thank you for your fast and kind answer.
    >
    > I have one more detailed question that I forgot to ask..
    >
    > The main reason I want to update freesurfer is to use better
hippocampal subfield and I want to make
    > the subfield based on my previous data (in the older version
freesurfer path)
    >
    > I expected to do recon-all without -all option (but only with
hippocampal subfield option) in the
    > new version because I've already done "recon-all -subjid ${subject}
-all -hippo-subfields" in the
    > older version.
    >
    > Can I do it with new version installed in a new location?
    >
    > Thanks again!
    >
    > Sincerely,
    >
    > Joonyoung.
    >
    >
    > 2017-12-12 10:44 GMT+09:00 Bruce Fischl fischl@nmr.mgh.harvard.edu:
    >       Hi Joonyoung
    >
    >       you can just install the new version in a new location and
point your path at it instead
    >       of the older version.
    >
    >       cheers
    >       Bruce
    >       On Tue, 12 Dec 2017, 강준영 wrote:
    >
    >             Hello!
    >
    >             I'm Joonyoung Kang, a graduate student in neuroscience.
    >
    >             I've been using freesurfer over an year and I realized
that I've used an old
    >             version of it.
    >
    >             So I decided to update freesurfer and I couldn't find a
way to do that.
    >
    >             Do I just have to re-install the new version of
freesurfer?
    >
    >             If so, do I have to make a backup for my previous data in
freesurfer
    >             folders?
    >
    >             Thank you!
    >
    >
    >
    >             p.s.
    >             I'm currently using MacOS X (10.11.6),
    >             freesurfer-Darwin-lion-stable-pub-v5.3.0, and
    >             Xquartz 2.7.11
    >
    >
    >             Sincerely,
    >
    >             Joonyoung Kang.
    >
    >
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