Hi Efrat, Could you send me the recon-all-status.log file for one of your v4.5 subjects that have completed recon-all without errors? You would find this file in the scripts sub-directory of the subject. -Louis

On Mon, 16 Apr 2012, Efrat Kliper wrote:

Dear FreeSurfer expert,

I am trying to run QA tools for verifying all steps of the FreeSurfer recon-all stream. I am working with FreeSurfer version 4.5.0. I don't see any optional flagged arguments in which i can specify the version i am working with (the default version is 5.1.). I will be grateful if you can help me with that. Thanks a lot efrat