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Thanks, Tim for your reply.
No, there is only "lh.pial" file exists not 'lh.pial_lgi. What might be the problem?
Any help would be appreciated
Thanks & regards -Korann
On Sat, Jul 6, 2019 at 9:30 PM freesurfer-request@nmr.mgh.harvard.edu wrote:
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Today's Topics:
- Re: [External] Re: rostral anterior cingulate fix? (Zeng,Victor (BIDMC - Psychiatry))
- Re: [External] Re: rostral anterior cingulate fix? (Bruce Fischl)
- Re: recon-all Error : inputs cannot have multiple frames. ( Yueming )
- Re: recon-all Error : inputs cannot have multiple frames. (Bruce Fischl)
- error while running pial_lgi for gyrification index (vittal korann)
- Re: error while running pial_lgi for gyrification index (Tim Sch?fer)
- Viewing Uncorrected Significance Map in Freeview (Marie Hill)
Message: 1 Date: Fri, 5 Jul 2019 17:42:28 +0000 From: "Zeng,Victor (BIDMC - Psychiatry)" vzeng@bidmc.harvard.edu Subject: Re: [Freesurfer] [External] Re: rostral anterior cingulate fix? To: Freesurfer support list freesurfer@nmr.mgh.harvard.edu Message-ID: 1562348548910.95994@bidmc.harvard.edu Content-Type: text/plain; charset="iso-8859-1"
Sorry, I thought I attached something Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab ph: 617 754 1237 --
From: freesurfer-bounces@nmr.mgh.harvard.edu < freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Bruce Fischl < fischl@nmr.mgh.harvard.edu> Sent: Friday, July 5, 2019 10:24 AM To: Freesurfer support list Subject: [External] Re: [Freesurfer] rostral anterior cingulate fix?
Hi Victor
can you render the parcellation in that area on the surface (in freeview) and show it to us?
cheers Bruce
On Fri, 5 Jul 2019, Zeng,Victor (BIDMC - Psychiatry) wrote:
Hi Freesurfer group -
I'm using FS6.0 dev-20190118, and I'm processing a few brain scans. I'm
seeing a misparcellation of
the right rostral anterior cingulate using tkmedit (I know tkmedit is
sorta deprecated), and it
doesn't seem inappropriate to use control point fixes. How would you
best fix this (I'm open to
using freeview), without just editing the aparc+aseg.mgz?
Victor Zeng Beth Israel Deaconess Medical Center Keshavan Lab ph: 617 754 1237 --
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-
vittal korann