HI Liesel

is it possible you are running out of RAM? Or disk space?

cheers Bruce On Tue, 24 Jun 2014, Liesel-Ann Meusel wrote:

Hi,

I am running recon-all and I am getting the following error during the mri_ca_register step (full log file is attached). Please let me know what I need to do to fix it.

Thank you, Liesel

writing output transformation to transforms/talairach.m3z... GCAMwrite registration took 4 hours, 17 minutes and 32 seconds. ERROR: mri_ca_register with non-zero status 1 but continuing despite the error #-------------------------------------- #@# CA Reg Inv Sun Jun  1 22:03:47 EDT 2014 /home/lmeusel/101_TEST/mri

mri_ca_register -invert-and-save transforms/talairach.m3z

Loading, Inverting, Saving, Exiting ... Reading transforms/talairach.m3z Inverting GCAM Saving inverse ERROR: mri_ca_register with non-zero status 0 Linux gateway.neuroinfo.rri 2.6.32-279.9.1.el6.x86_64 #1 SMP Tue Sep 25 21:43:11 UTC 2012 x86_64 x86_64 x86_64 GNU/Linux

recon-all -s 101_TEST exited with ERRORS at Sun Jun  1 22:04:52 EDT 2014

-- Liesel-Ann MeuselPostdoctoral Fellow Rm 722, Rotman Research Institute, Baycrest 3560 Bathurst St. Toronto ON  M6A 2E1 416-785-2500 ext. 3507 lmeusel@research.baycrest.org