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Dear FreeSurfer experts,
I want to calculate functional connectivity analysis with 400 parcel, we divided the parcellation with "mirs-divide-parcellation" before, now I want to know when I use "fcseed-config" to obtain the seed signal, how can I set the id (with segid flag)? I mean how can I use and set my manual lookup table with 400 parcel instead of FreeSurfer-lookup table? "$FREESURFER_HOME/FreeSurferColorLUT.txt"
I would be grateful if you could help me.
Best regards,
Sara,
freesurfer@nmr.mgh.harvard.edu