p.s. if you look in the recon-all.log you will see:

total used free shared buff/cache available Mem: 4025436 1115872 794808 54712 2114756 2510316 Swap: 0 0 0

which looks like something else was running on your machine and taking a lot of the total RAM

cheers Bruce

On Thu, 13 Dec 2018, 张亮军 wrote:

External Email - Use Caution

Hello FreeSurfer Developers,

I'm attempting to use "recon-all -i T1.nii.gz -s zhang -all", but there is a ERROR:

saving intensity scales to aseg.auto_noCCseg.label_intensities.txt saving sequentially combined intensity scales to aseg.auto_noCCseg.label_intensities.txt Killed Linux ubuntu 4.10.0-37-generic #41~16.04.1-Ubuntu SMP Fri Oct 6 22:42:59 UTC 2017 x86_64 x86_64 x86_64 GNU /Linux recon-all -s zhang exited with ERRORS at Wed Dec 12 22:18:35 CST 2018 For more details, see the log file /usr/local/freesurfer/subjects/zhang/scripts/recon-all.log

I've searched the list and no similar errors have been reported. Does anyone have any thoughts on how to t rouble-shoot this one? Also, I've attached the recon-all.log in case it's of any use.

1. FreeSurfer version: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0-2beb96c
2. Platform: Ubuntu16.04 LTS(VMware Workstations pro)
3. uname -a: Linux ubuntu 4.10.0-37-generic #41~16.04.1-Ubuntu SMP Fri Oct 6 22:42:59 UTC 2017 x86_64 x86_

64 x86_64 GNU/Linux 4) recon-all.log: killed Best, Liangjun.