External Email - Use Caution
Hello Freesurfer developers,
Thank you for developing Freesurfer!
I am postdoc at UC Berkeley and I am using Freesurfer 6.0 to create flat maps on which I draw my ROI's. The flat maps/patches are created in TKSURFER. However, I typically use Freeview to visualise my volumes and inflated surfaces, overlay data etc. I am trying to open flatmap maps in freeview but I am not able to. I was wondering if it was possible to load flatmaps in freeview and draw ROI's on them and overlay my data?
OS: MacBook OS
Thank you.
Best, Devavrat
Hi Devavrat,
Freeview in FS 6.0 can’t load patches but the upcoming FS 7 can. If you want to give it try, you can download the latest build from here: https://surfer.nmr.mgh.harvard.edu/fswiki/UpdateFreeview https://surfer.nmr.mgh.harvard.edu/fswiki/UpdateFreeview
To load a patch, run: freeview -f lh.inflated:patch=patch_file
Best, Ruopeng
On Apr 7, 2020, at 9:24 PM, Devavrat Vartak PhD dvartak@berkeley.edu wrote:
External Email - Use CautionHello Freesurfer developers,
Thank you for developing Freesurfer!
I am postdoc at UC Berkeley and I am using Freesurfer 6.0 to create flat maps on which I draw my ROI's. The flat maps/patches are created in TKSURFER. However, I typically use Freeview to visualise my volumes and inflated surfaces, overlay data etc. I am trying to open flatmap maps in freeview but I am not able to. I was wondering if it was possible to load flatmaps in freeview and draw ROI's on them and overlay my data?
OS: MacBook OS
Thank you.
Best, Devavrat
-- Devavrat Vartak, PhD Postdoctoral Researcher
Helen Wills Neuroscience Institute and School of Optometry
Mailing address: 360 Minor Hall #2020 University of California, Berkeley Berkeley, CA, 94720-2020 USA
Website: www.dvartak.com http://www.dvartak.com/
Email: dvartak@berkeley.edu mailto:dvartak@berkeley.edu devavratvartak@gmail.com mailto:devavratvartak@gmail.com
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