Just run cp $FeatDir/reg/freesurfer/example_func2standard.mat $FeatDir/reg/example_func2standard.mat doug

On 04/14/2012 10:04 PM, Michelle Umali wrote:

Hi Freesurfers, I ran reg-feat2anat to register freesurfer data to FSL feat in order to generate some binary masks. Afterwards I edited the FEAT registration to standard space via:

reg-feat2anat --feat subjectX.feat --manxfm func2std

and saved the registration.

i want to use these example_func2standard edits, but I just now realized that I didn't add the -overwrite-exf2std flag.

Is there anyway to generate a new example_func2standard.mat from the exf2std.register.dat that has the edits to replace the FSL-generated one? I would love to avoid re-editing everything.

Many thanks for any help. Michelle _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer