Dear FreeSurfer experts,
I was wondering if there is anywhere a table or hint, suggesting which particular steps of all the recon-all steps (i.e. https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable) are part of the volume-based or the surface-based stream or both? I also found this diagram https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllBlockDiagram but I'm unsure if the colours are supposed to give me any clues.
I'm familiar with the broad processing stages of the two streams off course but would very much love to understand the details better :)
Thank you very much for your help, Martina
everything upto the tesselation is the volume-based stream. You can also look in recon-all-status.log for which commands are run when doug On 07/17/2013 04:58 PM, Martina Papmeyer wrote:
Dear FreeSurfer experts,
I was wondering if there is anywhere a table or hint, suggesting which particular steps of all the recon-all steps (i.e. https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllDevTable) are part of the volume-based or the surface-based stream or both? I also found this diagram https://surfer.nmr.mgh.harvard.edu/fswiki/ReconAllBlockDiagram but I'm unsure if the colours are supposed to give me any clues.
I'm familiar with the broad processing stages of the two streams off course but would very much love to understand the details better :)
Thank you very much for your help, Martina
freesurfer@nmr.mgh.harvard.edu