Hi Ale

I guess the best way to do this would be to use mris_fill to fill the interior of the ?h.white surface, then remove every voxel in the resulting volume that isn't one of:

left/right cortex, left/right white matter, any callosum label

cheers, Bruce On Wed, 25 Jun 2014, Alejandra Machado wrote:

Hello!

I'm a begginer user with this programm and i need some help, please! I was wondering if it's possible to get an output only for WM segmentation but excluding the filling in of CSF and/or hyperintensities? And if so, would it be possible to convert this to nii ?

Thank you! Ale