Good Morning, I have a quick question regarding the launch of tksurfer. I have recently downloaded Freesurfer onto a Mac OSX after having some experience with it on a previous Mac. However, it had been preinstalled on that Mac, and I am afraid that I have perhaps installed it wrong on this one as when I test the launching of qdec and tksurfer, nothing happens. The terminal doesn`t spit out a command error, but it never launches the program. This was also a problem on the previous Mac for qdec but not for tksurfer. Therefore, I have tried to install everything again from square one and am not sure why now neither program is launching. I am simply trying to test the command "tksurfer bert lh pial". My environment is setup with Freesurfer and I am trying to launch from the surfs directory, as that worked on the previous Mac, but it is still giving me nothing. Any tips you could provide me with?
All the best, Claire
Hi Claire
can you send us the full output of the command from the time you type tksurfer
thanks Bruce On Wed, 15 Oct 2014, Claire Morley wrote:
Good Morning, I have a quick question regarding the launch of tksurfer. I have recently downloaded Freesurfer onto a Mac OSX after having some experience with it on a previous Mac. However, it had been preinstalled on that Mac, and I am afraid that I have perhaps installed it wrong on this one as when I test the launching of qdec and tksurfer, nothing happens. The terminal doesn`t spit out a command error, but it never launches the program. This was also a problem on the previous Mac for qdec but not for tksurfer. Therefore, I have tried to install everything again from square one and am not sure why now neither program is launching. I am simply trying to test the command "tksurfer bert lh pial". My environment is setup with Freesurfer and I am trying to launch from the surfs directory, as that worked on the previous Mac, but it is still giving me nothing. Any tips you could provide me with?
All the best, Claire
--
We shall not cease from exploration. And the end of all our exploring will be to arrive where we started and know the place for the first time- T.S. Eliot
Hi Claire,
How did you install FreeSurfer? Did you follow the instructions here: http://surfer.nmr.mgh.harvard.edu/fswiki/MacOsInstall
? HTH, D
On Wed, Oct 15, 2014 at 4:02 AM, Claire Morley clairemorley2014@u.northwestern.edu wrote:
Good Morning, I have a quick question regarding the launch of tksurfer. I have recently downloaded Freesurfer onto a Mac OSX after having some experience with it on a previous Mac. However, it had been preinstalled on that Mac, and I am afraid that I have perhaps installed it wrong on this one as when I test the launching of qdec and tksurfer, nothing happens. The terminal doesn`t spit out a command error, but it never launches the program. This was also a problem on the previous Mac for qdec but not for tksurfer. Therefore, I have tried to install everything again from square one and am not sure why now neither program is launching. I am simply trying to test the command "tksurfer bert lh pial". My environment is setup with Freesurfer and I am trying to launch from the surfs directory, as that worked on the previous Mac, but it is still giving me nothing. Any tips you could provide me with?
All the best, Claire
--
We shall not cease from exploration. And the end of all our exploring will be to arrive where we started and know the place for the first time- T.S. Eliot
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Bruce Fischl -
Claire Morley -
dgw