I am new to FreeSurfer and have been tasked with running a large number of subjects through the pipeline. I wanted to inquire about the benefits of manually editing the output data at each step as outlined by the manual. Is there anything in the literature regarding the differences, if any, between data that is manually edited vs. not manually edited. Any guidance on this topic would be much appreciated. Thank you.
Dear Liane,
I am in the same position as you. I really hope that someone can give a hint, too.
Sincerely, Ye
On Mon, Jul 1, 2013 at 1:57 PM, Liane Hunter < liane.hunter@med.einstein.yu.edu> wrote:
I am new to FreeSurfer and have been tasked with running a large number of subjects through the pipeline. I wanted to inquire about the benefits of manually editing the output data at each step as outlined by the manual. Is there anything in the literature regarding the differences, if any, between data that is manually edited vs. not manually edited. Any guidance on this topic would be much appreciated. Thank you. -- Liane Hunter MD/Ph.D Candidate Albert Einstein College of Medicine
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it really depends on data quality. We typically only do manual interventions for large-scale errors or if they are in regions that we want to investigate strong prior hypotheses about
cheers Bruce On Mon, 1 Jul 2013, ye tian wrote:
Dear Liane, I am in the same position as you. I really hope that someone can give a hint, too.
Sincerely, Ye
On Mon, Jul 1, 2013 at 1:57 PM, Liane Hunter liane.hunter@med.einstein.yu.edu wrote:
I am new to FreeSurfer and have been tasked with running a large number of subjects through the pipeline. I wanted to inquire about the benefits of manually editing the output data at each step as outlined by the manual. Is there anything in the literature regarding the differences, if any, between data that is manually edited vs. not manually edited. Any guidance on this topic would be much appreciated. Thank you.-- Liane HunterMD/Ph.D Candidate Albert Einstein College of Medicine
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The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
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ye tian