Dear Freesurfers,
I would like to show several ROI labels that we created on top of an an average brain which demonstrates the group results of cortical thinning with advancing age. In qdec, when I go into File>Load Label, I can only view one label at a time. Is there a way to show several labels together on an average brain, just for visualization purposes?
cheers,
Cat
Cat,
Hi, unfortunately qdec doesnt support loading multiple labels. However, you can use tksurfer to do that. Another useful thing to know is that the right most column of a label file can hold a stats value, so with a bit of text editing/scripting, you can store say a p-value into the rois label file (same value at each vertex within an roi), and then use the load stats value function of tksurfer to shown different labels at different colors, useful for displaying results for a publication.
Nick
On Tue, 2012-06-19 at 16:13 -0700, Cat Chong wrote:
Dear Freesurfers,
I would like to show several ROI labels that we created on top of an an average brain which demonstrates the group results of cortical thinning with advancing age. In qdec, when I go into File>Load Label, I can only view one label at a time. Is there a way to show several labels together on an average brain, just for visualization purposes?
cheers,
Cat _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
Hi Cat
you can certainly do it in tksurfer.
cheers Bruce On Tue, 19 Jun 2012, Cat Chong wrote:
Dear Freesurfers,
I would like to show several ROI labels that we created on top of an an average brain which demonstrates the group results of cortical thinning with advancing age. In qdec, when I go into File>Load Label, I can only view one label at a time. Is there a way to show several labels together on an average brain, just for visualization purposes?
cheers, Cat
freesurfer@nmr.mgh.harvard.edu