When I follow the advice to prevent lgi problems with MATLAB 2013 using this update to 5.3 recon-all: For Version 5.3 change the line 6148 in recon-all from if ( ! $found_tpNid ) then to if ( ! $found_tpNid && ! $DoAddTp ) then
11 new subjects that I tested running from scratch fail in NuCorrect. When reverting to the original recon-all, the same subjects all ran to completion without error. Any suggestions on this? I am running on Redhat Linux 6.3 with MATLAB 2013a.
Thanks,
Kathy Pearson
freesurfer@nmr.mgh.harvard.edu