Hi all, I'm a new user of freesurfer. It's a simple question.
I want to convert ?h.smoothwm and ?h.smoothwm.nofix to .mgz as binary volume (foreground/background = 1/0). So I found mri_surf2vol command, but the command I used could be problem.
mri_surf2vol --template ./orig/001.mgz --volreg reg.dat --surface
../surf/lh.white --hemi lh
error message is below.
--- gdiagno = -1 ERROR: cannot recognize the type of ../surf/lh.white ---
If mri_surf2vol cannot be used for what I want, is there any method to convert ?h.white? Thanks,
try using mris_fill.
cheers Bruce On Tue, 13 Apr 2010, Jerald Zhao wrote:
Hi all, I'm a new user of freesurfer. It's a simple question.
I want to convert ?h.smoothwm and ?h.smoothwm.nofix to .mgz as binary volume (foreground/background = 1/0). So I found mri_surf2vol command, but the command I used could be problem.
mri_surf2vol --template ./orig/001.mgz --volreg reg.dat --surface
../surf/lh.white --hemi lh
error message is below.
gdiagno = -1 ERROR: cannot recognize the type of ../surf/lh.white
If mri_surf2vol cannot be used for what I want, is there any method to convert ?h.white? Thanks,
freesurfer@nmr.mgh.harvard.edu
-
Bruce Fischl -
Jerald Zhao