Hi Adarsh – The command works fine with our data. When you open your input file, does it look like the example in the tutorial below?

http://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/TraculaStatistics#Anisot...

Thanks, a.y

From: <freesurfer-bounces@nmr.mgh.harvard.edumailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Adarsh Nellore <adarsh.nellore150@gmail.commailto:adarsh.nellore150@gmail.com> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Date: Tuesday, February 14, 2017 at 2:02 PM To: "freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edumailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] tractstats2table error

Hi Anastasia,

This was the full command:

tractstats2table --inputs /usr/local/freesurfer/subjects/control_data/diffusion_tracs/Control200/dpath/lh.slft_PP_avg33_mni_flt/pathstats.overall.txt --overall --tablefile /usr/local/freesurfer/subjects/control_data/diffusion_tracs/Control200/dpath/lh.slft_PP_avg33_mni_flt.All.table

And this was the full output:

File "/usr/local/freesurfer/bin/tractstats2table", line 138 print 'ERROR: inputs are not specified' ^ SyntaxError: Missing parentheses in call to 'print'

Thanks a lot, Adarsh