Can you send the log file, your command line, and full terminal output?

On 8/21/2020 12:31 AM, Nandita Vijayakumar wrote:

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Dear FreeSurfer team,

I have processed my data through the longitudinal stream of FreeSurfer6 using the -hires flag. I would like to apply the patch to fix the global metrics, but seem to run into an error when supplying the longitudinal subject directory. I've tried running the following command:

recon-all -long sub-001_wave1.long.sub-001 sub-001 -segstats -parcstats -parcstats2 -parcstats3 -wmparc -balabels

But get the following error:

Unmatched ".

The command seems to work fine on the cross-sectional directories. So I'm wondering if the patch can be applied to longitudinal directories?

Thanks,

Nandi

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