Are there any labeled nifti atlases that correspond to the freesurfer parcellation atlases output from recon-all? I'm basically interested in visualization of group results. -Greg
do you want it in the volume or the surface? In the volume, there should be a file called $FREESURFER_HOME/subjects/fsaverage/mri/aparc+aseg.mgz you can convert that to nifti
On 04/01/2016 02:20 PM, Gregory Book wrote:
Are there any labeled nifti atlases that correspond to the freesurfer parcellation atlases output from recon-all? I'm basically interested in visualization of group results. -Greg
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