I have downloaded and installed freesurfer-20040218-Darwin.tar.gz with no seeming problems. I modified my .tcshrc file, checked directories and think all is in order. I operate in X11 windows. I still can not find csurf or any work-around. Does anyone have any ideas about my problem?
Hi, Robert:
Look at the head portion of csurf. It has the reference to tixwish, which may not agree with what you have. Modify that line to what you have.
Tosa
willcott@pop.ruf.rice.edu wrote:
I have downloaded and installed freesurfer-20040218-Darwin.tar.gz with no seeming problems. I modified my .tcshrc file, checked directories and think all is in order. I operate in X11 windows. I still can not find csurf or any work-around. Does anyone have any ideas about my problem?
--
M. Robert Willcott 1807 Orchard Country Lane Houston, TX 77062 713.302.5148
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
One problem I have had in the past is that the program csurf was not packaged as an executable. Go to your freesurfer folder then go to bin/noarch. Check that csurf is in fact an executable (ls -l csurf would work fine). If it's not an executable try making it one. HTH.
-Xander
On Fri, 2005-02-11 at 09:43, willcott@pop.ruf.rice.edu wrote:
I have downloaded and installed freesurfer-20040218-Darwin.tar.gz with no seeming problems. I modified my .tcshrc file, checked directories and think all is in order. I operate in X11 windows. I still can not find csurf or any work-around. Does anyone have any ideas about my problem? -- M. Robert Willcott 1807 Orchard Country Lane Houston, TX 77062 713.302.5148
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
I have downloaded and installed freesurfer-20040218-Darwin.tar.gz with no seeming problems. I modified my .tcshrc file, checked directories and think all is in order. I operate in X11 windows. I still can not find csurf or any work-around. Does anyone have any ideas about my problem?
Can you find other programs, like mri_info? If so, then, as the other person suggested, make sure csurf is executable:
$ chmod a+x $FREESURFER_HOME/bin/noarch/csurf
If not, then make sure your path is set up. Try:
$ printenv PATH
and see if $FREESURFER_HOME/bin/Darwin shows up in there. If not, perhaps you aren't sourcing the FreeSurferEnv.csh file.
freesurfer@nmr.mgh.harvard.edu
-
Kevin Teich -
willcott＠pop.ruf.rice.edu -
Xander Meadow -
Yasunari Tosa