Dear experts,
I am trying to find a probabilistic map of the visual cortical area V3A. I have not been able to find this particular area in the standard atlases in FSL or FreeSurfer. The Jülich Histological atlas contains a V3V ROI but not V3A. Do any of you know have this ROI as a file or do you know of an atlas which contains it? An estimation based on an experiment, e.g. an average from retinotopic maps of healthy subjects would also be very helpful.
All the best, Anders
Wang, Mruczek, Arcaro, Kastner (2014). Probabilistic Maps of Visual Topography in Human Cortex. Cerebral Cortex, Oct;25(10):3911-31
2016-07-11 12:13 GMT+02:00 Anders Hougaard ahougaard@dadlnet.dk:
Dear experts,
I am trying to find a probabilistic map of the visual cortical area V3A. I have not been able to find this particular area in the standard atlases in FSL or FreeSurfer. The Jülich Histological atlas contains a V3V ROI but not V3A. Do any of you know have this ROI as a file or do you know of an atlas which contains it? An estimation based on an experiment, e.g. an average from retinotopic maps of healthy subjects would also be very helpful.
All the best, Anders
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no, sorry, we don't have that data. If you ask the authors for it we would be happy to distribute it with FS if they are willing.
cheers Bruce On Mon, 11 Jul 2016, Francesca Strappini wrote:
Wang, Mruczek, Arcaro, Kastner (2014). Probabilistic Maps of Visual Topography in Human Cortex. Cerebral Cortex, Oct;25(10):3911-31
2016-07-11 12:13 GMT+02:00 Anders Hougaard ahougaard@dadlnet.dk: Dear experts, I am trying to find a probabilistic map of the visual cortical area V3A. I have not been able to find this particular area in the standard atlases in FSL or FreeSurfer. The Jülich Histological atlas contains a V3V ROI but not V3A. Do any of you know have this ROI as a file or do you know of an atlas which contains it? An estimation based on an experiment, e.g. an average from retinotopic maps of healthy subjects would also be very helpful.
All the best, Anders
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il
Excellent, thank you. The link to the ROI files is this: http://www.princeton.edu/~napl/vtpm.htm
Best, Anders
2016-07-11 12:26 GMT+02:00 Francesca Strappini <francescastrappini@gmail.com
:
Wang, Mruczek, Arcaro, Kastner (2014). Probabilistic Maps of Visual Topography in Human Cortex. Cerebral Cortex, Oct;25(10):3911-31
2016-07-11 12:13 GMT+02:00 Anders Hougaard ahougaard@dadlnet.dk:
Dear experts,
I am trying to find a probabilistic map of the visual cortical area V3A. I have not been able to find this particular area in the standard atlases in FSL or FreeSurfer. The Jülich Histological atlas contains a V3V ROI but not V3A. Do any of you know have this ROI as a file or do you know of an atlas which contains it? An estimation based on an experiment, e.g. an average from retinotopic maps of healthy subjects would also be very helpful.
All the best, Anders
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
Hi Anders
thanks. Seems like you can just get the data from them and are all set.
Bruce
On Mon, 11 Jul 2016, Anders Hougaard wrote:
Excellent, thank you.The link to the ROI files is this: http://www.princeton.edu/~napl/vtpm.htm
Best, Anders
2016-07-11 12:26 GMT+02:00 Francesca Strappini francescastrappini@gmail.com: Wang, Mruczek, Arcaro, Kastner (2014). Probabilistic Maps of Visual Topography in Human Cortex. Cerebral Cortex, Oct;25(10):3911-31
2016-07-11 12:13 GMT+02:00 Anders Hougaard ahougaard@dadlnet.dk: Dear experts, I am trying to find a probabilistic map of the visual cortical area V3A. I have not been able to find this particular area in the standard atlases in FSL or FreeSurfer. The Jülich Histological atlas contains a V3V ROI but not V3A. Do any of you know have this ROI as a file or do you know of an atlas which contains it? An estimation based on an experiment, e.g. an average from retinotopic maps of healthy subjects would also be very helpful.
All the best, Anders
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
-- Francesca Strappini, Ph.D. Neurobiology Department Weizmann Institute of Science 234 Herzl Street, Rehovot 7610001 Israel Tel.: +972 58 444 2584 E-mail: francesca.strappini@weizmann.ac.il
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
freesurfer@nmr.mgh.harvard.edu
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Anders Hougaard -
Bruce Fischl -
Francesca Strappini