External Email - Use Caution
Hello all,
I want to assess the skull stripping quality performed in Freesurfer (autorecon1) and in FSL. Does any program enable to evaluate the skull stripping quality? If so, which metric is used for an evaluation?
Hi Adam
the most common metric would involve doing a manual stripping, usually of a T2. Note that in FS we designed it using a risk-minimization approach that weighs removing brain as much more costly (~10x I think) then leaving around skull.
cheers Bruce
On Mon, 17 Feb 2020, Adam Rytina wrote:
External Email - Use Caution
Hello all,
I want to assess the skull stripping quality performed in Freesurfer (autorecon1) and in FSL. Does any program enable to evaluate the skull stripping quality? If so, which metric is used for an evaluation?
freesurfer@nmr.mgh.harvard.edu
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Adam Rytina -
Bruce Fischl