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Hi,
I've been trying to use TRACULA on my data, trying to setup a configuration file but I am having some difficulty on how to incorporate my data.
I have a DWI scan with 65 volumes (1 b0 image, 64 with b = 1000) I also have separate volumes for b0 pairs having opposite phase-encoding directions.
I am not sure how to incorporate these into the configuration file. I can do it with using just the one b0 image, but I'd like to use the opposite phase-encoding as well.
How would I go about this in the configuration file?
Thanks, Fahad Hannan
freesurfer@nmr.mgh.harvard.edu