Hi Bruce

Thank you for useful advice. I referred to FreesurfuerWiki and tried to use tkmedit to check whether recon is accurate or not. Now I am trying to use freeview. Is it possible to do these procedure with freeview instead of tkmedit? Regards,

Kojima

----- Original Message -----

From: Bruce Fischl fischl@nmr.mgh.harvard.edu To: kojima_masaki_mail@yahoo.co.jp; Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: 2016/6/14, Tue 21:50 Subject: Re: [Freesurfer] tkmedit

Hi Kojima

tkmedit has been deprecated. Can you try using freeview instead?

cheers Bruce On Tue, 14 Jun 2016, kojima_masaki_mail@yahoo.co.jp wrote:

...

Hi.

I have this error, when I was doing tkmedit PSY1001fs/Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mri/brainma sk.mgz -aux /Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mri/wm.mgz -surfs

ERROR: Assertion failed: (!c->out.queue_len), function write_vec, file xcb_conn.c, line 195. Abort

what is the problem?

Kojima

[IMAGE]

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.

Thanks! I will use it.

Best,  Kojima

----- Original Message -----

From: Bruce Fischl fischl@nmr.mgh.harvard.edu To: kojima_masaki_mail@yahoo.co.jp; Freesurfer support list freesurfer@nmr.mgh.harvard.edu Date: 2016/6/15, Wed 10:32 Subject: Re: [Freesurfer] tkmedit

yes! On Wed, 15 Jun 2016, kojima_masaki_mail@yahoo.co.jp wrote:

...

Hi Bruce

Thank you for useful advice. I referred to FreesurfuerWiki and tried to use tkmedit to check whether recon is accurate or not. Now I am trying to use freeview. Is it possible to do these procedure with freeview instead of tkmedit?

Regards,

Kojima

----- Original Message -----       From: Bruce Fischl fischl@nmr.mgh.harvard.edu       To: kojima_masaki_mail@yahoo.co.jp; Freesurfer support list       freesurfer@nmr.mgh.harvard.edu       Date: 2016/6/14, Tue 21:50       Subject: Re: [Freesurfer] tkmedit

Hi Kojima

tkmedit has been deprecated. Can you try using freeview instead?

cheers Bruce On Tue, 14 Jun 2016, kojima_masaki_mail@yahoo.co.jp wrote:

...

Hi.

I have this error, when I was doing tkmeditPSY1001fs/Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mr

i/brainma

...

sk.mgz -aux

/Users/MRI/Desktop/fsurfer_test_kojima/Surf_data_main/PSY1001fs/mri/wm.mgz

...

-surfs

ERROR: Assertion failed: (!c->out.queue_len), function write_vec, file

xcb_conn.c,

...

line 195. Abort

what is the problem?

Kojima

[IMAGE]

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.

---

Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.