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Permutation testing in freesurfer

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O'Shea,Andrew

28 Jul 2014 28 Jul '14

11:54 a.m.

Hello all, Does anyone know of a toolbox/script that would automate permutation testing in freesurfer? For example running x number of random permutations of a covariate and recording max sig levels similar to what the software SnPM does for SPM analyses? Thanks. -Andrew

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Douglas N Greve

28 Jul 28 Jul

11:55 a.m.

This is build into mri_glmfit-sim. Run it with --help to get more info doug On 07/28/2014 11:54 AM, O'Shea,Andrew wrote:

Hello all, Does anyone know of a toolbox/script that would automate permutation testing in freesurfer? For example running x number of random permutations of a covariate and recording max sig levels similar to what the software SnPM does for SPM analyses? Thanks. -Andrew

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