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Hello,
My name is Jordan and I am working on cluster correction between two groups. I ran the step before: "freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:overlay=sig.mgh". I was able to find many significant values of p<0.05. However, when I ran the cluster correction there were no significant cluster in any of my group comparisons. I had to run mri_glmit-sim in the terminal each time for every directory because running the script that looped resulted in "cwp: command not found".
I was wondering if there is something I could look for that is causing an issue or something else I can do to fix this. I wanted to reach out to make sure my results aren't completely null.
Thank you, Jordan Wagner
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which part do you want to fix? the command not found or the lack of clusters?
On 6/28/2023 6:25 PM, jordan wagner wrote:
External Email - Use Caution
Hello,
My name is Jordan and I am working on cluster correction between two groups. I ran the step before: "freeview -f $SUBJECTS_DIR/fsaverage/surf/lh.inflated:overlay=sig.mgh". I was able to find many significant values of p<0.05. However, when I ran the cluster correction there were no significant cluster in any of my group comparisons. I had to run mri_glmit-sim in the terminal each time for every directory because running the script that looped resulted in "cwp: command not found".
I was wondering if there is something I could look for that is causing an issue or something else I can do to fix this. I wanted to reach out to make sure my results aren't completely null.
Thank you, Jordan Wagner
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jordan wagner