Hi All,
I just started using version 4.5, and when I use aparcstats2table to create a table the structures are being listed in a strange order. The ?h.aparc.stats file itself has them in the order in which they were in previous versions (essentially alphabetical except for frontal pole), but for whatever reason when made into a .txt file with aparcs2statstable it seems to jumble them up (but in a consistent way). Any ideas regarding how to get the program to order them in the older standard way?
Hi All,
I just started using version 4.5, and when I use aparcstats2table to create a table the structures are being listed in a strange order. The ?h.aparc.stats file itself has them in the order in which they were in previous versions (essentially alphabetical except for frontal pole), but for whatever reason when made into a .txt file with aparcs2statstable it seems to jumble them up (but in a consistent way). Any ideas regarding how to get the program to order them in the older standard way?
The following mis-feature highlighted by Nathan is fixed and the fixes are available from the following location. Replacing your existing aseg/aparcstats2table is highly recommended.
ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/misc/allplatforms/
Please copy the files to your $FREESURFER_HOME/bin/ ( if you want to be safe, backup your existing 3 files )
These files fix the issue that the order of the segs or parcellations in aseg.stats or ?h.aparc.stats is not maintained in the output table. ( Though the values in the table are right, the order is random )
Krish
On 1/4/10 11:15 AM, Dankner, Nathan (NIH/NIMH) [F] wrote:
Hi All,
I just started using version 4.5, and when I use aparcstats2table to create a table the structures are being listed in a strange order. The ?h.aparc.stats file itself has them in the order in which they were in previous versions (essentially alphabetical except for frontal pole), but for whatever reason when made into a .txt file with aparcs2statstable it seems to jumble them up (but in a consistent way). Any ideas regarding how to get the program to order them in the older standard way?
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