photoshop? Sorry, I don't think there's an easy way to do it in tksurfer without making your own curv-format file. You could do it in freeview though if you want to mess around with it.
cheers Bruce On Wed, 23 Sep 2009, Guang Zeng wrote:
I loaded the left and right hippocampus mesh using tksurfer, it works, Thanks!
If I want to paint left hippocampus as yellow and right hippocampus as green after I load them using tksurfer, how could I do it?
Thanks! Guang
Date: Thu, 17 Sep 2009 07:24:11 -0400 From: fischl@nmr.mgh.harvard.edu To: grojas@computer.org CC: freesurfer@nmr.mgh.harvard.edu; greve@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] how to extract segmented hippocampus
you can use mri_tessellate to create a mesh, then tksurfer will visualize it On Thu, 17 Sep 2009, Gonzalo Rojas Costa wrote:
Dear Douglas:
And how can I view (render) in 3D the hippocampus that I got frok aseg.mgz with the mri_binarize command ?...
Sincerely,
Gonzalo Rojas Costa
mri_binarize with --match 17 or --match 53 will do it
doug
Guang Zeng wrote:
Hi, there,
I'd like to extract the left and right hippocampus from aseg.mgz, so basically what I want is a volume where left hippocampus have value (or label) 17 and right hippocampus have value (or label) 53, all the other place are zero.
How can I do it? Using mri_threshold or mri_label2vol?
Thanks a lot!
Guang
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