Right!
:)
Thanks
Zahra (Mona) Nasiriavanaki
Postdoctoral Research Fellow
Martinos Center for Biomedical Imaging
Massachusetts General Hospital
149 13th Street, 149-2615
Charlestown, MA, USA, 02129
________________________________ From: freesurfer-bounces@nmr.mgh.harvard.edu freesurfer-bounces@nmr.mgh.harvard.edu on behalf of shahin@nmr.mgh.harvard.edu shahin@nmr.mgh.harvard.edu Sent: Thursday, July 26, 2018 9:10:19 AM To: Freesurfer support list Subject: Re: [Freesurfer] fcseed-config
You need to run fcseed-sess to generate that.
Hi all
I am running a seed to whole brain connectivity analysis. I am using the labels that I have made from functional ROIs.
When I run fcseed-config, It makes the configuration file but not the .dat files.
Here is my command:
fcseed-config -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/lh.DIPS_sup2018.mgz -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/lh.DIPS_inf2018.mgz -segid 1 -seg $SUBJECTS_DIR/${subj}/mri/rh.DIPS.2018.mgz -fcname bilateral_DIPS.dat -fsd rest -rlf restruns -mean -cfg ../all_subjects/${subj}/bilateral_DIPS.config -overwrite
I appreciate if someone tells me how to fix it.
Thanks Mona
Zahra (Mona) Nasiriavanaki
Postdoctoral Research Fellow
Martinos Center for Biomedical Imaging
Massachusetts General Hospital
149 13th Street, 149-2615
Charlestown, MA, USA, 02129
Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_____________________________________
Shahin Nasr
Assistant Prof. in Radiology Harvard Medical School Martinos Imaging Center, MGH Bldg 149, 13th street, Charlestown, MA 02129
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer