Hi I would like to extract cooridantes of "aparc.a2009s+aseg.mgz" file. This file is stored in the mri folder. Would you please help me in this regards?
kind regards Mamun
On Thu, Jul 27, 2017 at 9:36 AM, Redwan Maatoug redwanmaatoug@gmail.com wrote:
Hi Doug,
Thank you for your reply, I have used the tool *surf_cluster* to have the MNI coordinates. Is it a good alternative to *mri_cor2label *?
Thank you very much, Regards, Redwan
On Wed, Jul 26, 2017 at 2:41 PM, Douglas N Greve < greve@nmr.mgh.harvard.edu> wrote:
mri_cor2label with extract the coordinates into a label file. The coordinates will be in "tkregisterRAS". What coordinate system do you want? See
See https://surfer.nmr.mgh.harvard.edu/fswiki/CoordinateSystems
On 07/25/2017 07:32 PM, Redwan Maatoug wrote:
Hi experts,
I just want to know a way to extract the coordinates from a ROI mgh
file.
I know that I can load the file with tksurfer but I have 100 .mgh files so if I could run a command line to have the coordinates in a .txt file or in a .m it would be helpful.
Thank you, Redwan
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