Hi Bruce,
I would like to read the anatomical labels with the corresponding Tal coordinates on tksurfer. However, the aparc.annot files are missing in the 'labels' sub-directory of each of the subjects. How can I regenerate them again?
Thanks, Phoebe ---- Original message ----
Date: Mon, 4 Apr 2005 14:39:04 -0400 (EDT) From: Bruce Fischl fischl@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] missing aparc.annot in 'labels'
directory
To: orphoebe@polyu.edu.hk Cc: freesurfer@nmr.mgh.harvard.edu
Hi Phoebe,
you shouldn't have to redo any of that stuff. Average7 is
only used as a
domain for visualizing group data, although you are better
off making an
average of the subjects in your study and using it instead
(in which case
you shouldn't need average7 at all)
cheers, Bruce
On Tue, 5 Apr 2005 orphoebe@polyu.edu.hk wrote:
Hi,
I just found out that I forgot to link average7 when I
did
the 'recon-all' on two subjects' brain data. Will it
affect
the talairach coordinates? Do I need to do the brain inflation again? Also, I found that the label files,
e.g.
lh.aparc.annot and rh.aparc.annot, which are expected to
be
in the 'labels' sub-folder of the subject directory. Is there any way that I can generate these labels files again?
Thank you for your help in advance.
Phoebe
Phoebe Suk-tak Chan, Ph.D. Assistant Professor The Hong Kong Polytechnic University Department of Optometry and Radiography Hunghom, Kowloon Hong Kong SAR Tel: (852) 2766 6095 Fax: (852) 2764 6051 _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu
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--- Phoebe Suk-tak Chan, Ph.D. Assistant Professor The Hong Kong Polytechnic University Department of Optometry and Radiography Hunghom, Kowloon Hong Kong SAR Tel: (852) 2766 6095 Fax: (852) 2764 6051