Re: [Freesurfer] Converting .dcm to COR files

Does the output directory exist and do you have permission to it?

btw, why are you using cor? We're trying to get people to stop :).

doug

camilo@nmr.mgh.harvard.edu wrote:

Hi Freesurfer help,

I am trying to convert my .dcm files to COR format. I use:

mri_convert -ot cor 003DCM 003

I get the following error:

mri_convert -ot cor 003DCM 003 reading from 003DCM... corRead(): can't open file /autofs/space/rao_001/users/patrickp/eeg_propofol/control_01... /bourget/control_01/mri/orig/003DCM/COR-.info

I am running the standar enviroment in the nmr, and the location of my files is: /autofs/space/rao_001/users/patrickp/eeg_propofol/control_01/... bourget/control_01/mri/orig

Can someone give me some advise in this issue?

Thanks,

Camilo

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