Hello, I ran recon-all on Friday. It ran for around a minute instead of 30-48 hours. Unfortunately, when I try tkmedit and other such commands, the pictures don't visualise. So today I first confirmed that the SUBJECTS_DIR was in Desktop path. (Because over the weekend it had gone back to usr/local... path and so I re-exported it just now.) Then I tried running recon-all again.
s0964091@CRIC-0012:~/Desktop/Allimages/MRIscan/janani/CRIC-0014_5679.adb.DICOM$ echo $SUBJECTS_DIR Desktop/Allimages/MRIscan/janani/CRIC-0014_5679.adb.DICOM s0964091@CRIC-0012:~/Desktop/Allimages/MRIscan/janani/CRIC-0014_5679.adb.DICOM$ recon-all -i Dhinakaran^Janani^-0002-0001-00001.dcm -i Dhinakaran^Janani^-0004-0001-00001.dcm -s subj001 ERROR: SUBJECTS_DIR Desktop/Allimages/MRIscan/janani/CRIC-0014_5679.adb.DICOM does not exist.
Can anyone help me understand what I can do? Thanks Jan