[Freesurfer] Manual editing after recon-all

Sindhuja Tirumalai Govindarajan

16 Sep 2011 16 Sep '11

2:49 p.m.

Hi all,

I ran into an issue similar to the manual editing problem discussed yesterday and earlier today. The pial surface seems to cut into the gray matter regions. However, there seems to be no wm problem in the neighborhood. Are there any tools to fix this?

I have attached snapshots for your reference. Any advice on how to include the gray matter would be helpful!

Thanks, Sindhuja

Attachments:

Coronal_brainmask.png (image/png — 50.1 KB)
Coronal_wm.png (image/png — 26.3 KB)
Axial_brainmask.png (image/png — 88.3 KB)

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