Hi Bruce! Thank you very much!
An error before that is:
ERROR: mri_ca_register with non-zero status 137 but continuing despite the error #-------------------------------------- #@# CA Reg Inv Thu Nov 7 18:46:24 PST 2013 /home/spaz/Cat/subjects/MGH020_SurferOutput/mri
mri_ca_register -invert-and-save transforms/talairach.m3z
Loading, Inverting, Saving, Exiting ... Reading transforms/talairach.m3z ERROR: cannot find or read transforms/talairach.m3z ERROR: mri_ca_register with non-zero status 0 Linux localhost.localdomain 3.6.11-4.fc16.x86_64 #1 SMP Tue Jan 8 20:57:42 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s MGH020_SurferOutput exited with ERRORS at Thu Nov 7 18:46:30 PST 2013
I have also attached whole recon-all.log
Thanks again, Katica ________________________________________ From: Bruce Fischl [fischl@nmr.mgh.harvard.edu] Sent: Monday, November 11, 2013 11:12 AM To: Boric, Katica A. Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] recon all error
Hi Katica
we need to see what happened before that that caused the talairach.mg3z to not be created.
cheers Bruce
On Mon, 11 Nov 2013, Boric, Katica A. wrote:
Greetings Freesurfers! recon-all -s XXX_SurferOutput exited with ERRORS
These are the errors in the log:
Reading transforms/talairach.m3z ERROR: cannot find or read transforms/talairach.m3z ERROR: mri_ca_register with non-zero status 0
I would really appreciate any advice!
Thank you very much,
Katica