24 May
2017
24 May
'17
9:57 a.m.
Dear Freesurfer Developers,
I want to extract the entorhinal cortex from the original T1 image of my subect's MRI scans. Is there a way to do it; I used the the commands below to extract the CA1 subfield of the hippocampus. Is there a similar way to do the same for the entorhinal cortex?
mri_extract_label lh.hippoSfLabels-T1.v10.FSvoxelSpace.mgz 206 leftCA1.mgz mri_extract_label rh.hippoSfLabels-T1.v10.FSvoxelSpace.mgz 206 rightCA1.mgz
mri_mask orig.mgz leftCA1.mgz orig_left_CA1.mgz mri_mask orig.mgz rightCA1.mgz orig_right_CA1.mgz
Many thanks,
Stephanos