26 May
2016
26 May
'16
10:56 p.m.
Hi all,
So I ran a recon-all -all on one of my subjects, and it completed without errors (according to the log). Now I would like to get cortical thickness numbers from this subject, but when I open the tutorial regarding this, it says it assumes that you already have a roi mask and a T1 in the same coordinate space as the roi mask.
Did the recon -all -all by any chance create these files? And if not, how can I?
So basically the question is; what do I have to do after recon -all -all in order to get cortical thickness numbers in roi's of my subjects?
Thanks in advance.
Marja