Hi Bruce, If I understand correctly, since the brainmask.mgz image has been normalized to the MNI-talairach template, the coordinate (0, 0, 0) should correspond to the anterior commissure point, right? Sorry for the trouble. Cheers, HweeLing
On 9/4/06 8:54 PM, "Bruce Fischl" fischl@nmr.mgh.harvard.edu wrote:
He HweeLing,
what kind of coordinate do you mean? If it's just the voxel coord, then I don't think it matters.
cheers, Bruce
On Mon, 4 Sep 2006, Lee HL wrote:
Hi Bruce and all,
I wish to convert the MGZ format image into ANALYZE format image.
I used the command line to convert the MGZ format image: "mri_convert -i brainmask.mgz -o brainmask.img --out_type spm".
When I display the image using SPM, the coordinate (0, 0, 0) appears at the posterior commissure. However, when I display the mgz format image using tkmedit, the coordinate (0, 0, 0) appears at the anterior commissure.
Was I using the correct command line to convert the image?
Thanks!
Cheers, HweeLing
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