Re: [Freesurfer] mri_convert for Philips dicoms

Try dcm2niix (not part of FS, you'll have to download and install)

On 9/17/19 3:10 PM, Mun, Anna wrote:

Dear FreeSurfer team,

I am working with data sent to us from other research site. They use Philips scanner and I can not run mri_convert on the dicoms. Is there other way to mri_convert and reconstruct Philips dicoms.

error log is:

WARNING: tag SeriesNumber not found
WARNING: tag image orientation not found
ERROR: GetDICOMInfo(): dcmGetDWIParams() 7

break DICOMRead.c:5228
Ref Series No = 0
ERROR: bits = 0 not supported.
Send email to freesurfer@nmr.mgh.harvard.edu

Thank you in advance!

Best, Anna

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