External Email - Use Caution
Greetings FS experts:
We are trying to run recon-all -s -qcache on a handful of brains processed in freesurfer v5.1.0. (it's an old dataset...5.1 makes the most sense for our purpose.)
The error is below:
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-------------------------------------- #@# 1/1 HMN080 Fri Mar 3 12:14:44 EST 2023 -------------- ----------------------- mri_surf2surf --srcsubject HMN080 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.51930/HMN080.1.mgh --sval /export/data/seahorse_ncdl/HMN/data/HMN080/surf/lh.thickness --sfmt curv --noreshape --no-cortex Segmentation fault (core dumped) Linux seahorse.umd.edu 3.10.0-1160.80.1.el7.x86_64 #1 SMP Sat Oct 8 18:13:21 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux
recon-all -s HMN080 exited with ERRORS at Fri Mar 3 12:14:48 EST 2023
Can you assist? OR perhaps tell us where to find the core dump file, which may have more information?
