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Hi fellow FreeSurfer users,
I am part of a longitudinal project and have a large dataset that has been processed in v6.
I have now upgraded to v7 and would like to update my processed data, retaining the existing manual masks and pial edits.
I found an old ReconAllChanges page (January 27, 2006, last updated 2012) referring to this as a “legacy data set” https://secure-web.cisco.com/1MoVgZUSO9R-A8IjZAHqOzDT9Py5A4Mq4VNrsSGB5DphedY...
I have also found a recon-all wiki page (https://secure-web.cisco.com/1EqY5oKya3ZRmkvhBV2hjYD2yCLyZAOJUT5Hd_RXPDPt5mD... last updated 2017) suggesting the use of the following command for legacy datasets: recon-all -subject subjectname -all -legacy
Unfortunately, the -legacy flag is not recognised in v7.
I would be grateful for any advice on how to update my existing data from v6.0.0 to v7.2.
Thank you in advance, Amanda
Amanda Boyes My pronouns are she/her/hers PhD Candidate and Research Assistant (Youth Mental Health) Thompson Institute USC Tel: +61 7 5456 3886 amanda.boyes@usc.edu.au | usc.edu.auhttp://secure-web.cisco.com/1otQ0N4r7tGUgtK8BkwMQjmBlIsM1lQpsIY-owcgNEj3Pphf8u8hg6pKUaB4b1mQGN_X58jCAi5cYzdSBJWCYS8Eqaoe_rMh-VK_L6ssHNySvKCEQZKJ8DZI3VrRN84CEkly55bT5dWXmYOd5YG0BDKo07OEhkOLoerbgTI9goUVuTDRUUXYNCfDCyMLfSX0pYq5W0my4k_HJyc5cqBmVn6CdZe8yxMA0yJksX6chFP2VG_8qnJ3ZP5qNnM5ZRD8iKm1oY7QwdNG1u3qdvM-gSA/http%3A%2F%2Fwww.usc.edu.au%2F [Logo, company name Description automatically generated] I acknowledge the Traditional Custodians of the lands and waters upon which the University’s campuses are located. I acknowledge their continuing connections to country and pay my respects to Elders past, present and emerging.
University of the Sunshine Coast | CRICOS Provider Number: 01595D
