Hello, I was wondering if you could point me in the direction of how to change the intensity thresholds when re-running scans through FS? We have another couple of scans that have good original scans but came out too bright. I've been searching the archives but not finding what I think we need. Thanks so much! Kathy
-----Original Message----- From: Bruce Fischl [mailto:fischl@nmr.mgh.harvard.edu] Sent: Thursday, April 01, 2010 3:01 PM To: Jones, Kathryn L Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] intensity normalization and control points
eek, that's pretty low contrast. You could certainly try, but you might be better of changing the intensity thresholds. What is your voxel size and acquisition parameters? On Thu, 1 Apr 2010, Jones, Kathryn L wrote:
Hello FS listers,
I apologize if this has been asked before and I missed it in the archives. Can you use control points to correct intensity in overly bright scans. I've attached an example pic.
Thanks for your help, Kathy
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