Dear Ishi,
At this point, you have a bunch of volumes for each subjects (in hippo test.txt), not maps. You can analyze them with your favorite statistical software ;-)
Cheers,
/E
Juan Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com
On Jun 24, 2021, at 09:36, Ishi Tandon <ishi.tandon@student.amity.edumailto:ishi.tandon@student.amity.edu> wrote:
External Email - Use Caution
Hello FS experts,
I have performed hippocampus subfield segmentation on my T1 scans.
I also gathered the volume from all my analyzed subjects through the following command -
quantifyHippocampalSubfields.sh T1 hippotest.txt
Now I want to perform statistics on these maps to find out the differences between groups. I am not sure if I should use mris_preproc and then follow the general GLM approach.
Could you please give me some clarification on this?
Thanks in advance.
Regards, Ishi Tandon (she/her) B.Tech + M.Tech - Cognitive Neuroscience Amity University, Rajasthan Contact- +918239259846 Email - ishi.tandon@student.amity.edumailto:ishi.tandon@student.amity.edu
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edumailto:Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer