look at mri_segstats. Run it with --help to get examples. Note that if your input volume has multiple frames, you can use --avgwf to get means of all the frames
On 4/19/2019 4:46 PM, Sims, Sara A (Campus) wrote:
External Email - Use Caution Hello! I have a surface overlay that I want to extract the mean of the values within a label and export to a text file. How can I do that? I was looking into mris_anatomical_stats, but does mris_anatomical_stats let you tell it what file to pull the data from instead of just doing the standard extractions? Alternatively, I would be fine with just extracting all the values within the label and then finding the mean on my own. How could I extract all the values within the label and exporting to a text file?
Thanks, Sara Sims
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