i did not load the color table separately in addition to the .annot. do i need to? i didn't create a customized color table. the parcellation (?h.aparc.splitcingulate.annot) i created using mris_divide_parcellation automatically generated the label names, but when it loads, the names for the colored labels are not accurate.
the sizes of the subregions are certainly different, but i don't know how they are ordered/numbered and it isn't obvious in looking at their volume measurements which is which.
thanks again, -cate
----- Original Message ----- From: Doug Greve greve@nmr.mgh.harvard.edu Date: Sunday, May 13, 2007 7:55 pm Subject: Re: [Freesurfer] labels for split parcellation To: Nick Schmansky nicks@nmr.mgh.harvard.edu Cc: Catherine Hartley cate@nyu.edu, Freesurfer Mailing List freesurfer@nmr.mgh.harvard.edu
The color table should be embedded in the annot. Are you sure you're loading the new annotation? Is it different than ?h.aparc.annot. They should at least have slightly different sizes (and diff with unix diff).
doug
On Sun, 13 May 2007, Nick Schmansky wrote:
Cate,
Have you loaded your own colortable? ie, the one that contains your
own
labels. In tksurfer, its File -> Label -> Load Color Table
Nick
On Sun, 2007-05-13 at 15:32 -0400, Catherine Hartley wrote:
Hi,
I've used mris_divide_parcellation to generate split the automatic parcellation into subregions. When I view the resulting annotation in tksurfer, the label names do not correspond to the subdivision names, so I am unable to tell which division is which (ie, which is rostralanteriorcingulate_div4, as none of them have this name). Is there a way to display these new label names?
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