Hi Bruce, Used v5.3 for original edits using the "recon" mode in freeview so edits used 1 for "off" and 255 for "on".
Jason
On Mon, Jul 28, 2014 at 9:22 AM, Bruce Fischl fischl@nmr.mgh.harvard.edu wrote:
Hi Jason
what version? Did it support recon mode? The edits need to use 1 for "off" and 255 for "on", otherwise we can't track them.
cheers Bruce On Mon, 28 Jul 2014, Jason Tourville wrote:
Hi Bruce,I used Freeview to edit the brainmask.mgz, wm.mgz, and
brain.finalsurfs.manedit.mgz volumes.
Cheers, Jason
On Fri, Jul 25, 2014 at 9:23 PM, Bruce Fischl <fischl@nmr.mgh.harvard.edu
wrote: Hi Jason. How were the edits done? Cheers Bruce
> On Jul 25, 2014, at 10:40 AM, Jason Tourville <jaytour@gmail.com> wrote: > > Hi there, > We have performed manual volume edits on a number of scans. Recently, we ran those scans through recon-all with a new Tal volume target. The seg and surfaces are improved using the new target but most of the manual edits performed on the earlier version would improve the surfaces. Is there an established means for porting the manually edited voxel values to the volumes of the new re-con? > > Thanks, > Jason > > > -- > Jason A. Tourville, Ph.D. > Research Assistant Professor > Department of Speech, Language, > and Hearing Sciences > Boston University > 677 Beacon St. > Boston, MA 02215 > Phone: (617)353-9484 > Fax: (617)353-7755
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-- Jason A. Tourville, Ph.D. Research Assistant Professor Department of Speech, Language, and Hearing Sciences Boston University 677 Beacon St. Boston, MA 02215 Phone: (617)353-9484 Fax: (617)353-7755
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