There is a script called tkmeditfv which runs freeview with tkmedit-style arguments. Most of the time, this is much easier
On 5/12/2020 3:30 PM, Hoopes, Andrew wrote:
Hi Aylin,
You can add this to your SetUpFreeSurfer script in $FREESURFER_HOME, but in general tkmedit is no longer supported after v6, please just use freeview.
Best
Andrew
*From: *freesurfer-bounces@nmr.mgh.harvard.edu on behalf of "Dincer, Aylin" aylin.dincer@wustl.edu *Reply-To: *FS Help freesurfer@nmr.mgh.harvard.edu *Date: *Monday, May 11, 2020 at 3:17 PM *To: *FS Help freesurfer@nmr.mgh.harvard.edu *Subject: *[Freesurfer] tkmedit in FreeSurfer 7.0
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Hi FreeSurfer Experts,
We are unable to use tkmedit using FreeSurfer 7.0 (centos 7). In the .xdebug_tkmedit file, it outputs the following error:
“Tcl_Init returned 1: Can't find a usable init.tcl in the following directories: /usr/pubsw/packages/tcltktixblt/current/lib/tcl8.4”
It looks like when we manually set the environmental variable TCL_LIBRARY to point to the tcl location in the $FREESURFER_HOME folder, tkmedit will open. Is there a way to fix this so it automatically sets this environmental variable?
Thanks!
Aylin
Aylin Dincer
Senior Research Technician
NeuroImaging Laboratories
Imaging Core, Benzinger Lab
314-362-3629
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