Hi Everyone,
Terminal output is: ///------------------------------------------------------------------------------------------------------////// saurabh@saurabh-Dell-System-XPS-L502X:/usr/local/freesurfer$* tkmedit* /usr/local/freesurfer/tktools*/tkmedit.bin: Command not found.*
saurabh@saurabh-Dell-System-XPS-L502X:/usr/local/freesurfer$ *tksurfer* /usr/local/freesurfer/tktools*/tksurfer.bin: Command not found*.
saurabh@saurabh-Dell-System-XPS-L502X:/usr/local/freesurfer$ *recon-all*
WARNING: tcsh v6.17.06 has an exit code bug! Please update tcsh!
USAGE: recon-all
Required Arguments: -subjid <subjid> -<process directive>
Fully-Automated Directive: -all : performs all stages of cortical reconstruction -autorecon-all : same as -all
Manual-Intervention Workflow Directives: -autorecon1 : process stages 1-5 (see below) -autorecon2 : process stages 6-23 after autorecon2, check white surfaces: a. if wm edit was required, then run -autorecon2-wm b. if control points added, then run -autorecon2-cp c. proceed to run -autorecon3 -autorecon2-cp : process stages 12-23 (uses -f w/ mri_normalize, -keep w/ mri_seg) -autorecon2-wm : process stages 15-23 -autorecon2-inflate1 : 6-18 -autorecon2-perhemi : tess, sm1, inf1, q, fix, sm2, inf2, finalsurf, ribbon -autorecon3 : process stages 24-34 if edits made to correct pial, then run -autorecon-pial -hemi ?h : just do lh or rh (default is to do both) . . . . ///--------------------------------------------------------------------------------------------------//
can any one help me in this problem.....?
Why* tkmedit *is not working.
I am seriously looking for solution asap.
Thanks in advance.
*Saurabh *