Re: [Freesurfer] Infant fs

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Dear Lilla,

I posted a similar question some week ago, I quote it here again, I would be grateful if you could provide feedback.

Regards,

Mic

From: Michelangelo Fabbrizzi <michefabb@gmail.com mailto:michefabb@gmail.com> Date: Wednesday, October 11, 2023 at 11:48 AM To: freesurfer@nmr.mgh.harvard.edu mailto:freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu mailto:freesurfer@nmr.mgh.harvard.edu> Cc: Sennott, Liam Ricker <LSENNOTT@mgh.harvard.edu mailto:LSENNOTT@mgh.harvard.edu> Subject: Use of infantFS and FS in the interval 2 - 4.5 years of age

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Dear FS experts,

I see it is recommended to use infantFS below 2 years of age, whereas FS has been used for 4.5 years and above. I was wondering what could be used in the interval 2 - 4.5 years of age: which are benefits and drawbacks of both?

Thanks, appreciated,

Mic

Il giorno 9 gen 2024, alle ore 09:45, Zollei, Lilla,Ph.D. LZOLLEI@mgh.harvard.edu ha scritto:

Hi Amrita,

The download link has been sent to you.

The thalamus does get segmented with infantFS and the LUT is the same as for the adult recon. I would process the 11 year old data with the adult pipeline.

Lilla

From: freesurfer-bounces@nmr.mgh.harvard.edu mailto:freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu mailto:freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Amrita Pal <palamritaorama@gmail.com mailto:palamritaorama@gmail.com> Sent: Monday, January 8, 2024 7:17 PM To: fsbuild <fsbuild@contbay.com mailto:fsbuild@contbay.com> Cc: freesurfer@nmr.mgh.harvard.edu mailto:freesurfer@nmr.mgh.harvard.edu <freesurfer@nmr.mgh.harvard.edu mailto:freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] Infant fs

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Thanks. I had filled out the form. How long do they take to respond? Also can I do subcortical thalamic segmentation with it? How is the LUT calculated both for infants and adults? Would you recommend an eleven year old's data analyzed by regular FS or infant FS?

On Mon, Jan 8, 2024, 6:19 PM fsbuild <fsbuild@contbay.com mailto:fsbuild@contbay.com> wrote:

Looks like you need to fill out the request form,

MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to behttps://surfer.nmr.mgh.harvard.edu/fswiki/infantFS https://secure-web.cisco.com/1dbtViRCP-0PLBypuF1Fj5qzAlPhc6KTriifPd6VDcWqF7xoGy5_RmCV9DESmq-vaRo-3N5IHH2TF6rrMRpO_rF9o-kVYjt32iOlxPl8QdsktF5angxtW8maDgywS6T2YemC-feHV4fj6xzNwsF-bcF4f6D-486xYs5tvXzZ3QQQqprCWXEfQWZ10W7sJI4Q9iu-cCqW3oX3tcfBBRIxhtN4BZpqC7wE6rtr_5SyH2ky7iZnp1ETsueZg0hPI5Ezeyu9Sc9HeqRXpJA3m3GHf1yVhw3opouW0WgOjcBZjX3kf13zML6zkRAuSlXTBO1YHihUgFjfkymA-I1e8pwsYtg/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FinfantFS

• R.

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On Jan 8, 2024, at 18:12, Amrita Pal <palamritaorama@gmail.com mailto:palamritaorama@gmail.com> wrote:

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Hello

I am trying to use the infant fs for processing my pediatric data. Where can I download the package?

Thanks and Regards Amrita _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu mailto:Freesurfer@nmr.mgh.harvard.edu MailScanner has detected a possible fraud attempt from "secure-web.cisco.com" claiming to behttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer https://secure-web.cisco.com/1q3i3hm3EROnrywxosdE0h5G5Lm9CLsKtE888a1uJOI697jTlhSteRGHD1e9f0Pc5BgfMduNYdiePtUTRKglQB4qo28DStCrpMs8Ewe4ZuuBxkx2OqLIq_SsQbLxPHWjT5eflEk-7aNOfWOE0oU0-Gx237c_QgiAl0jgieZgVTWJoLSU94UHK-6PwGPEcEV2fTGiWUvBZ8ANkSN7kxRjXdZGgWerFallwZqBtrFCcDIY6qxMRSj8QSGTKSxsT0W1xdH0knHXFojd8P4ln5LGoqESukGtlDXID5GR2Q9BDjMFV8cj7bx2J5RS3fcKc48la92IOiw-5nLG3PPKMOk2gpA/https%3A%2F%2Fmail.nmr.mgh.harvard.edu%2Fmailman%2Flistinfo%2Ffreesurfer

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