Hi Nick I run Qdec 1.2 and all cases have been processed with freesurfer-Linux-centos4_x86_64-stable-pub-v4.2.0 Olivier On 25/05/2011, at 21:18, Nick Schmansky wrote:
what version of freesurfer does this happen with?
n. On Wed, 2011-05-25 at 14:17 +1000, Olivier Piguet wrote:
Good afternoon,
When running qdec, I receive the following error message:
Writing to /Volumes/workingdata/FTD/T1/subjects/qdec/Untitled/contrasts.sig.mgh reading group avg surface area 822 cm^2 from file ERROR: could not find volume /Volumes/workingdata/FTD/T1/subjects/fsaverage/surf/../mri/orig. Does it exist? Reading in average area /Volumes/workingdata/FTD/T1/subjects/fsaverage/surf/lh.white.avg.area.mgh reading group avg surface area 1041 cm^2 from file ERROR: could not find volume /Volumes/workingdata/FTD/T1/subjects/fsaverage/surf/../mri/orig. Does it exist? Reading in average area /Volumes/workingdata/FTD/T1/subjects/fsaverage/surf/lh.pial.avg.area.mgh reading group avg surface area 822 cm^2 from file ERROR: could not find volume /Volumes/workingdata/FTD/T1/subjects/fsaverage/surf/../mri/orig. Does it exist?
I have run all subjects with qcache and I am using fsaverage. I have checked the files in the fsaverage folder. Although the file orig. does not exist, there is a file called orig.mgz in the mri folder. I have tried to rename this file (i.e., removing the 'mgz' part) but this did not remove the error.
Any suggestion would be appreciated.
Thanks
Olivier Piguet Neuroscience Research Australia Sydney NSW, Australia
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