Hi, Doug;
Is the bug still in FS5.0.
When I used mri_convert to reorient a 4D BOLD volume. All frames except the first frame are discarded. My command: mri_convert --out_orientaiton LAS f.nii.gz flas.nii.gz
Is there a convenient way to reorient the 4D volume to match the MNI template in FSL ?
fslswapdim in fsl can not adaptively swap to the assigned orientation based on the nii header.
Best
Zonglei Zhen
On Fri, Mar 12, 2010 at 6:40 AM, Douglas N Greve greve@nmr.mgh.harvard.eduwrote:
This is a bug in the released version of FS. Our development version is fixed. I've put a version here
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_convert
ythomas wrote:
Hi,
I am trying to downsample a 4D volume using mri_convert. However, it seems to be killing the 4 dimension. For example, if I do
mri_convert -voxsize 4 4 4 tmp.mgz tmp444.mgz
The original volume which is 256 x 256 x 256 x 120 becomes 64 x 64 x 64.
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